Cyberinfrastructure Working Group: Difference between revisions
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*[http://www.idigbio.org/contact/Dr._Andrea_Matsunaga Andréa Matsunaga] (Co-Lead), iDigBio IT | *[http://www.idigbio.org/contact/Dr._Andrea_Matsunaga Andréa Matsunaga] (Co-Lead), iDigBio IT | ||
*[ | *[http://www.idigbio.org/contact/Joanna_McCaffrey Joanna McCaffrey] (Co-Lead), iDigBio Biodiversity Informatics Manager | ||
*[http://www.idigbio.org/contact/Dr._Reed_Beaman Reed Beaman], iDigBio Senior Personnel | *[http://www.idigbio.org/contact/Dr._Reed_Beaman Reed Beaman], iDigBio Senior Personnel | ||
*[http://www.idigbio.org/contact/Renato_J._Figueiredo Renato Figueiredo], iDigBio IT | *[http://www.idigbio.org/contact/Renato_J._Figueiredo Renato Figueiredo], iDigBio IT | ||
*[http://www.idigbio.org/contact/Alex_Thompson Alex Thompson], iDigBio IT | *[http://www.idigbio.org/contact/Alex_Thompson Alex Thompson], iDigBio IT | ||
*[ | *[http://www.idigbio.org/contact/Greg_Traub Greg Traub], iDigBio IT | ||
*[http://www.idigbio.org/contact/Yonggang_Liu Yonggang Liu], iDigBio IT | *[http://www.idigbio.org/contact/Yonggang_Liu Yonggang Liu], iDigBio IT | ||
*[http://www.idigbio.org/contact/Kyuho_Jeong Kyuho Jeong], iDigBio IT | *[http://www.idigbio.org/contact/Kyuho_Jeong Kyuho Jeong], iDigBio IT | ||
*[http://www.idigbio.org/contact/Casey_A._McLaughlin Casey McLaughlin], iDigBio IT | *[http://www.idigbio.org/contact/Casey_A._McLaughlin Casey McLaughlin], iDigBio IT | ||
*James Beach, [ | *[mailto:beach@ku.edu James Beach], [[Creating A PALEONICHES| Paleoniches TCN]] IT/Co-PI, University of Kansas | ||
*[mailto:andrew.brown@kesoftware.com Andrew Brown] KE Software | *[mailto:andrew.brown@kesoftware.com Andrew Brown] KE Software | ||
*Edward Gilbert, [ | *[mailto:egbiodiversity@gmail.com Edward Gilbert], [[North American Lichens and Bryophytes - Sensitive Indicators of Environmental Quality and Change| Lichens & Bryophytes]], and [[Southwest Collections of Arthropods Network (SCAN)| SCAN]] TCNs IT, Symbiota | ||
*Corinna Gries, [ | *[mailto:cgries@wisc.edu Corinna Gries], [[North American Lichens and Bryophytes - Sensitive Indicators of Environmental Quality and Change| Lichens & Bryophytes]], PI | ||
*Paul L Heinrich, [ | *[mailto:Paul.Heinrich@nau.edu Paul L Heinrich], [[Southwest Collections of Arthropods Network (SCAN)| SCAN TCN]] IT | ||
*[mailto:dmasaki@usgs.gov Derek Masaki], BISON | *[mailto:dmasaki@usgs.gov Derek Masaki], BISON | ||
*[mailto:kseltmann@amnh.org Katja Seltmann], [ | *[mailto:kseltmann@amnh.org Katja Seltmann], [[Thematic Focus: Collaborative Research - Plants, Herbivores, and Parasitoids: A Model System for the Study of Tri-trophic Associations| Tri-trophic TCN]] IT, AMNH | ||
*[mailto:nahil.sobh@GMAIL.COM Nahil Sobh], [ | *[mailto:nahil.sobh@GMAIL.COM Nahil Sobh], [[InvertNet: An Integrative Platform for Research on Environmental Change, Species Discovery and Identification| InvertNet TCN]] IT, Co-PI | ||
*Omar Sobh, [ | *[mailto:ocazoodle@gmail.com Omar Sobh], [[InvertNet: An Integrative Platform for Research on Environmental Change, Species Discovery and Identification| InvertNet TCN]] IT | ||
Presentations from iDigBio IT: | Presentations from iDigBio IT: | ||
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*[http://www.idigbio.org/content/guid-guide-data-providers-0 GUID Guide] (June 26, 2013) | *[http://www.idigbio.org/content/guid-guide-data-providers-0 GUID Guide] (June 26, 2013) | ||
*[http://www.idigbio.org/content/idigbio-data-ingestion-requirements-and-guidelines Data Ingestion requirements and guidelines] (May 2013) | *[http://www.idigbio.org/content/idigbio-data-ingestion-requirements-and-guidelines Data Ingestion requirements and guidelines] (May 2013) | ||
*[ | *[http://www.idigbio.org/content/idigbio-image-file-format-requirements-and-recommendations Image format requirements and recommendations] (September 21, 2012) | ||
*[[iDigBio Virtual Appliances]] (November 2013) | *[[iDigBio Virtual Appliances]] (November 2013) | ||
*[[iDigBio APIs]] (November, 2013) | *[[iDigBio APIs]] (November, 2013) | ||
*[ | *[http://www.idigbio.org/content/idigbio-intellectual-property-policy Intellectual property policy] (April 17, 2012) | ||
Miscellaneous documentation: | Miscellaneous documentation: | ||
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[mailto:idigbio-cywg-l@lists.ufl.edu Cyberinfrastructure Working Group listserv] idigbio-cywg-l@lists.ufl.edu | [mailto:idigbio-cywg-l@lists.ufl.edu Cyberinfrastructure Working Group listserv] idigbio-cywg-l@lists.ufl.edu | ||
Ex Officio: [ | Ex Officio: [http://www.idigbio.org/contact/Dr.%20Jose%20Fortes José Fortes], iDigBio Director for Computational Activities | ||
Please feel welcome to explore other [[IDigBio Working Groups|working groups]]. | Please feel welcome to explore other [[IDigBio Working Groups|working groups]]. | ||
Revision as of 19:29, 2 January 2014
The Cyberinfrastructure Working Group (CYWG) was established as an outcome of the iDigBio IT Standards Workshop held in Gainesville, FL on March 28-30, 2012. In line with the iDigBio roadmap, the focus of the initial group will be on the iDigBio data ingestion procedures related to API (Application Programming Interface) or appliance specification, implementation and test.
The working group will produce material with concrete data ingestion use cases from TCNs, provide input about the existing cyberinfrastructure, produce data ingestion requirements, and help evaluate iDigBio services and appliances implementations.
To express an interest in joining the working group, please contact Andréa Matsunaga.
Current members:
- Andréa Matsunaga (Co-Lead), iDigBio IT
- Joanna McCaffrey (Co-Lead), iDigBio Biodiversity Informatics Manager
- Reed Beaman, iDigBio Senior Personnel
- Renato Figueiredo, iDigBio IT
- Alex Thompson, iDigBio IT
- Greg Traub, iDigBio IT
- Yonggang Liu, iDigBio IT
- Kyuho Jeong, iDigBio IT
- Casey McLaughlin, iDigBio IT
- James Beach, Paleoniches TCN IT/Co-PI, University of Kansas
- Andrew Brown KE Software
- Edward Gilbert, Lichens & Bryophytes, and SCAN TCNs IT, Symbiota
- Corinna Gries, Lichens & Bryophytes, PI
- Paul L Heinrich, SCAN TCN IT
- Derek Masaki, BISON
- Katja Seltmann, Tri-trophic TCN IT, AMNH
- Nahil Sobh, InvertNet TCN IT, Co-PI
- Omar Sobh, InvertNet TCN IT
Presentations from iDigBio IT:
- Wed, January 23rd, 2013 - 1:00pm EST (iDigBio DwC-A Pull Ingestion)
- Tue, February 19th, 2013 - 1:00pm EST (iDigBio Image Ingestion Appliance - presentation slides)
- Mon, September 9th, 2013 - 10:00am EDT (CYWG iDigBio v3 Preview - presentation slides)
Meetings with individual TCNs:
- Wed, September 04, 2013 3:00 PM-3:30 PM (NEVP)
- Wed, September 04, 2013 2:00 PM-2:30 PM (Paleoniches)
- Tue, August 20, 2013 1:00 PM-1:30 PM (SCAN)
- Mon, May 13, 2013 - 2:00pm EST (InvertNet)
- Tue, June 26th, 2013 - 10:00am EST (TTD-AMNH Data ingestion)
- Tue, July 3rd, 2013 - 10:00am EST (TTD-AMNH Image ingestion)
Related documentation from iDigBio:
- Data Ingestion Guidance
- GUID Guide (June 26, 2013)
- Data Ingestion requirements and guidelines (May 2013)
- Image format requirements and recommendations (September 21, 2012)
- iDigBio Virtual Appliances (November 2013)
- iDigBio APIs (November, 2013)
- Intellectual property policy (April 17, 2012)
Miscellaneous documentation:
- Example of trivial transformations on INHS fish dataset
- Example of transformations on InvertNet image metadata dataset
Join us via AdobeConnect: http://idigbio.adobeconnect.com/it
Cyberinfrastructure Working Group listserv idigbio-cywg-l@lists.ufl.edu
Ex Officio: José Fortes, iDigBio Director for Computational Activities
Please feel welcome to explore other working groups.