IDigBio Working Groups
Overview
iDigBio supports a number of Working Groups and Interest Groups, which form and dissolve organically according to current needs. Working Groups and Interest Groups are small, enduring, topic-focused, collaborative groups of individuals (typically 10-15 participants). Members of these groups collaborate virtually via the iDigBio Forums, Listservs, Wiki, Tele/Video-Conferencing, and/or via onsite meetings to resolve issues and advance progress on the goals of the group. Group membership may change over time; however, the structure and objectives of the group are long-standing. Temporary Working/Interest Groups are typically focused on delivery of short-term objectives, while standing Working Groups are tasked with ongoing research, development, and improvement activities.
This page provides an overview of iDigBio's current (active) and disbanded (inactive) Working Groups and Interest Groups. The section "Overlap with Other Working Groups" should be used to list subject areas that may duplicate some effort from another Working/Interest Group. When Working/Interest Group activities stray into these overlapping subject areas, then collaboration between working groups is warranted for those tasks or objectives. |
Forming or Dissolving a Working/Interest Group
Working Groups and Interest Groups are allowed to form and dissolve organically according to current needs. No formal proposal to iDigBio is required to form or dissolve a Working/Interest Group; simply create and complete the basic information about the group on this page. The Working/Interest Group leader is responsible for maintaining the accuracy of the information on this page. |
Active Working Groups
API User Group (R-based)
Background: This group originated based on conversations at the ADBC Summit 2019. You can link to this wiki section using the short link http://bit.ly/idigbio-api-wg.Data Field | Details |
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Status | Active |
Members |
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Mission & Scope | This group focuses on using tools such as the iDigBio API (Application Programming Interface) to work with biodiversity occurrence data in R for the purposes of both collections management, e.g. to review specimen data quality issues, and downstream research, e.g. to facilitate reproducible and reusable methods. Community members of all backgrounds (collections staff, researchers, IT, etc.) and levels of programming experience (including R novice) are encouraged to use this group as a place to discover and discuss API data access, issues, and solutions, as well as to build a dispersed network of API power users. This group will maintain a repository of relevant code for reuse and identify concrete improvements that could be made to the iDigBio API documentation. |
Links | |
Meetings |
Join us for open office hours on the second and fourth Wednesday of every month at 3:30pm Eastern! |
Arctos Working Group
Data Field | Details |
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Status | Active |
Members |
Mariel Campbell (Chair), Museum of Southwestern Biology, University of New Mexico, Albuquerque, NM Please see a complete and up-to-date list of additional working group members on the arctosdb.org website. |
Mission & Scope | The nitty gritty operations of Arctos are managed by an appointed Working Group, which consists of museum curators and collection managers who oversee communications, documentation, development priorities, and outreach. The Chair of the Working Group serves as the liaison between the Steering Committee, Arctos programmers, the user community, and Arctos programmers. Beginning in September 2017, the Arctos Working Group will host monthly webinars. |
Links | |
Webinar Recordings |
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Augmented Reality Public Education/Outreach Working Group (ARPEO)
Background: In 2014, the iDigBio Steering Committee voted to fund the production of a set of augmented reality (AR) flashcards similar to those portrayed in https://www.youtube.com/watch?v=STc8Nsx36MI for the ADBC community's public outreach. |
Data Field | Details |
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Status | Active |
Members |
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Mission & Scope | The working group will produce one card per TCN for a desktop/mobile AR software application. Each card will convey information about the TCN and the value of its targeted biodiversity research specimens and will provide augmented reality buttons that link to further information on the web. For example, a card with a 2-D herbarium specimen image on it could spring to life through the augmented reality viewer, producing a 3-D model of the fresh flower of the species that can be manipulated by turning the card. Combining the herbarium specimen image and an insect card image in the viewer could potentially launch a pollination video—a response that would not occur with either card alone. The goal is to have an exciting interactive tool for formal and informal education initiatives while building collaboration on the education and outreach front within our ADBC community. |
Overlap with Other Working Groups | |
Links | Wiki |
Augmenting OCR (aOCR)
Background: The Augmenting OCR working group formed from the first iDigBio Summit in 2011 out of a community consensus wish to attempt improving OCR output and algorithm tools to speed up the digitization process. Initial group members were suggested by those present at Summit 2011.
Our current working group met, in person, at a workshop in October 2012 to learn more about each other's use of OCR and OCR output, plan a February 2013 hackathon, develop content for our iSchools 2013 iConference workshop panel, and learn more about the latest developments in handwriting recognition. We put together iDigBio's first hackathon and presented our working group plans at iConference13. In December of 2013, at the iDigBio CITScribe hackathon, the aOCR working group built some working demos of visualization tools that facilitate searching of OCR output. These tools present novel ways to create record sets for citizen scientists, researchers, and data validators too. A recorded demonstration iDigBio webinar: Visualize Text Data From OCR Output on 22 January 2014 presented live demos of these OCR output visualization tools to show how they fit in a digitization workflow. |
Data Field | Details |
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Status | Done (Inactive), activated when a need arises |
Members |
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Mission & Scope | Engage experts in the biodiversity and information technology fields to identify opportunities to broadly implement existing effective OCR tools and enhance existing Machine and Natural Language Processing technologies to meet the needs of the biodiversity community. Want to know more? Contact Bryan Heidorn or Deborah Paul or any other member of the working group. We'd like to hear from you! |
Overlap with Other Working Groups | Needing access to the specimen label images on the iDigBio server, the aOCR working group overlaps with the cyberinfrastructure working group. This includes OS issues as well as hardware minimum requirements necessary for whatever hack-a-thon type activities the aOCR group persues. |
Links |
Biodiversity Collection Management Solutions Working Group
Background: A Special Interest Group for Collections Management Software Providers was scheduled as part of the Society for Preservation of Natural History Collections Meeting in Chicago (2019) with this program abstract:
The Collections Management Software Special Interest Group is open to anyone who develops, manages, or uses specialized collection management software as well as those who aggregate data generated from these systems. We will begin a conversation regarding interoperability and data quality issues affecting all natural history collections. In response to the meeting, a Google Forum Group has been created to continue discussion. |
Data Field | Details |
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Status | Active |
Members |
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Mission & Scope | The members of this group are seeking solutions that will increase interoperability between existing biodiversity collection management solutions and improve data quality overall. |
Links |
Biodiversity Informatics Management (BIM) Working Group
Data Field | Details |
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Status | Active |
Members |
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Mission & Scope | The role of biodiversity informatics management and biodiversity informatics managers as a recognized profession is becoming increasingly important to digitization programs, biodiversity data management, and to museum organizational hierarchy. The most successful digitization programs visited by Nelson and Paul (2012) in preparation for their paper in Zookeys were directly dependent on the presence of strong biodiversity informatics managers with well-defined roles, supported from the top of the organizational hierarchy, and focused on providing guidance and service to digitization staff and initiatives. The institutionalization of this role will ensure the sustainability of digitization initiatives. Members of the Droid 1 workgroup recognized this need as an important component underlying successful implementation of digitization workflows and practices, and strongly suggested that iDigBio sponsor a working group focused on this issue. |
Overlap with Other Working Groups | |
Links | Wiki, Listserv |
Data Management Interest Group (DMI)
Keeping up with data requires certain skills and infrastructure. This Interest Group discusses issues surrounding shared data and the help and information the community needs in order to ensure the provider has the most up-to-date versions of their own datasets. Many providers find their data enriched by an aggregator, only to discover their own database cannot hold the enriched data, or that they do not have the skills needed to update their database. It is our intent in this group, to provide a forum for discussion, and act as a resource for guidance to point providers toward potential solutions. At the same time, this group is aware that the shared-data landscape is a moving target. To keep up, we invite anyone with an interest in this topic to join us. Currently we plan to meet bi-monthly.
Interest Group Kickoff Webinar: Thursday, August 7th 2014. 1:00 - 2:00 PM EDT iDigBio Calendar Announcement |
Data Field | Details |
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Status | Active |
Members |
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Past Members | |
Mission & Scope | We aim to help the community with the challenges of keeping up with shared data by pointing those who need help to the existing resources or gather more about what needs to be done. |
Overlap with Other Working Groups | We overlap somewhat with CYWG, BIM, and DROID |
Links | Wiki DMig Listserv |
Developing Robust Object to Image to Data (DROID)
Focus on the development of media-generating digitization workflows.
DROID1: Flat Sheets and Packets
The various preparation-specific DROID working groups was spawned from the DROID workshop, held in Gainesville, Florida in May 2012. The purpose of this workshop was an exploration of digitization workflows and methods for improving workflow efficiency across preparation types. The DROID 1 working group is focused on flat sheets and packets digitization, primarily as this relates to herbarium collections. Flat Sheets and Packets completed a set of workflows in fall 2012 and published them on iDigBio's Documentation Page.
An herbarium digitization workshop was spawned from the DROID effort,during which the workflows developed by Flat Sheets and Packets were presented and distributed. A digitization training workshop wiki has been created to provide links to resources for this and upcoming workshops spawned by the initial DROID workshop. DROID 1 workflows development also led to considerations of imaging standards, which resulted in the development of iDigBio's statement of Image File Format Requirements and Recommendations, also published in fall 2012. |
Data Field | Details |
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Status | Active |
Members |
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Mission & Scope | The Flat Sheets and Packets Working Group (DROID1) is devoting its attention to developing workflow modules and tasks recommendations for vascular and non-vascular plant specimens. |
Overlap with Other Working Groups | See WG for DROID2 and DROID3 |
Links | Wiki
Training Workshops Wiki |
DROID2: Pinned Specimens in Trays and Drawers
Data Field | Details |
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Status | Active |
Members |
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Mission & Scope | The Pinned Specimens in Trays and Drawers Working Group is devoting its attention to developing workflow modules and task lists for digitizing dry, pinned specimens. |
Overlap with Other Working Groups | See WG for DROID1 and DROID3 |
Links | Wiki |
DROID3: Things in Spirits
Data Field | Details |
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Status | Active |
Members |
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Mission & Scope | The working group will devote its attention to specimens in jars and of greater 3D dimensionality. |
Overlap with Other Working Groups | See WG for DROID1 and DROID2 |
Links | Wiki |
DROID4: 3D objects in Trays
Data Field | Details |
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Status | Active |
Members |
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Past Members |
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Mission & Scope | The working group will devote its attention to 3D objects in drawers and boxes. |
Overlap with Other Working Groups | See WG for DROID1, DROID2, and DROID3 |
Links | Wiki |
Education & Outreach (E&O)
Data Field | Details |
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Status | Active |
Members |
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Mission & Scope | This working group will:
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Overlap with Other Working Groups | |
Links | Wiki: about the working group, meeting notes and links to documentation from the working group. |
Fluid-preserved Arthropod and Microscopic Slide Imaging Interest Group
Data Field | Details |
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Status | Active |
Coordinator |
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Mission & Scope | This working group will:
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Overlap with Other Working Groups | |
Links | Wiki: about the working group, meeting notes, links to documentation, meeting schedule. |
Georeferencing Working Group (GWG)
Data Field | Details |
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Status | Active |
Members |
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Past Members |
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Mission & Scope | We're building a community of expert georeferencing trainers from our first and second Train-the-Trainers (TTT) Georeferencing Workshops. Check out our [videos] anyone can use for training. We're also helping to advance the capabilities of georeferencing tools. Want to know more? Contact any member of the working group. We'd love to hear from you. |
Overlap with Other Working Groups | |
Links | Georeferencing Wiki: a compiled, annotated listing of helpful links / resources for georeferencing Georeferencing Resources: descriptions and links to what's available (wiki, list serve, forum,... on this website for help with georeferencing. |
iDAGUnite (iDigBio, DiSSCo, ALA, and GBIF Unite) Working Group
Data Field | Details |
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Status | Active |
Members |
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Mission & Scope | The iDAGUnite (iDigBio, DiSSCo, ALA, and GBIF Unite) Working Group is working to formalize and expand existing cooperative relationships among the world’s four largest biodiversity data aggregation networks to catalyze a quantum leap in the availability and accessibility of biodiversity research data worldwide. This group will establish iDAGUnite as a global Network of Networks (NoN) of people, data, and infrastructure and address the mandates of two worldwide conferences of experts designed to facilitate these efforts. |
Overlap with Other Working Groups | |
Links | Wiki, |
Integrating Collections and Ecological Research (ICER)
Data Field | Details |
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Status | (Inactive), but content now being found relevant for COVID19 needs |
Members |
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Mission & Scope |
The Integrating Collections and Ecological Research (ICER) Working Group is inspired by efforts to expand and enhance the community of those using collections data in their scientific research. Recent publications provide evidence the ecology community is calling for more robust and strategic connections between the ecology and collection communities. For example, iDigBio has collaborated at recent Ecological Society of America Conferences with the Natural History Section, and the Historical Records group. The initial two main foci of ICER are to 1) figure out how best to insure ecologists know about existing collections data resources, 2) bring the two communities together to discuss suitability of the data captured from field specimen collection for ecologists. |
Overlap with Other Working Groups | |
Links | ICER Working Group Wiki |
International Whole-Drawer Digitization Interest Group (WDD)
Interoperability for Public Participation in Digitization (CitSciInterop)
Data Field | Details |
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Status | Active |
Members |
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Mission & Scope | Improve interoperability among the major actors in the new domain of public participation in digitization of biodiversity research specimens. |
Overlap with Other Working Groups | The group's goals most closely complement those of the User Engagement for Public Participation in Digitization Working Group. |
Links |
North American Network of Small Herbaria Working Group (NANSH)
Data Field | Details |
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Status | Active |
Members |
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Mission & Scope | TBD |
Overlap with Other Working Groups | See WG for DROID1, DROID2, DROID3, and DROID4 |
Links | Wiki |
Outlier Detection and Documentation by Collectors Working Group (ODD Collectors)
Data Field | Details |
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Status | Active |
Members |
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Mission & Scope | In this era of global change, it is increasingly important to detect and report change at the collecting event, rather than delaying until specimen data is digitized or later used for research. Biological outliers (e.g., in phenology, distribution, morphology/anatomy, etc.) may indicate the beginnings of significant, transformative change that merits immediate attention. Collectors are on the front lines of observing that change and need the encouragement, training, cyberinfrastructure, and semantics to report change more effectively to stakeholders who can use the information. The goals of this working group are to provide each of those things to the community.
Potential products from this working group include recommendations for empowering collectors as sentinels of change; content for training the next generation of collectors; standards, protocols, and best practices for collectors to detect and document change; ontology development for outlier description; and cyberinfrastructure for reporting outliers directly to those who can use the information. |
Paleo Data and Digitization Working Group (PaleoDigi)
Data Field | Details | |
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Status | Active | |
Members |
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Mission & Scope | All things paleontology, data, and digitization. We are also coordinating with the TDGW Paleo Interest Group [1]. | |
Overlap with Other Working Groups | See WG for DROID1, DROID2 and DROID3 | |
Links | Wiki, Listserv |
Project Management Interest Group (PMIG)
Data Field | Details | |
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Status | Active | |
Members |
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Mission & Scope | To be a forum for TCN's project managers and other interested parties to discuss PM issues, insights, and general discussion. | |
Overlap with Other Working Groups | ||
Links | Resources, Listserv |
Sustainability Working Group (SWG)
Data Field | Details |
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Status | Active |
Members |
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Mission & Scope | The charge for the group is to write a proposal to conduct a feasibility study around charging for the use of data services. This proposal is part of the requirements for iDigBio funding from participants. Once the proposal is reviewed and potentially funding the group will move forward with their charge. This Working Group will present their report to iDigBio and to the broader TCN community. |
Overlap with Other Working Groups | |
Links | Wiki
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Symbiota Working Group (SWG)
Data Field | Details |
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Status | Not Active |
Members |
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Mission & Scope |
The Symbiota Working Group is composed of developers and end users, where end users include primarily managers of Symbiota portals but can be any end user who wants to help improve Symbiota as a software application or the data portal functionality as a whole. The 29 Symbiota portals encompass plants, lichens, bryophytes, algae, fungi, invertebrates, and to a lesser degree vertebrates. Symbiota portals primarily function as web portals for museums to submit and annotate specimen or observation records. Symbiota portals serve the data to iDigBio and to any other aggregators that want to harvest Darwin Core archives. Symbiota also provides data packaging (e.g., checklists) visualization (mapping and images), education material (keys, identification quizzes) and easy access to data sets as downloadable csv files. Thus, Symbiota portals allow researchers to compile and screen data sets for further analysis or educators to integrate biodiversity data for use in the classroom. A key challenge is to know when it is good to develop a capacity in Symbiota, partner with a third party to provide added functionality (e.g., georeferencing, mapping) and when to let another entity provide the functionality (e.g., dedicated aggregator). Now is an important point in time to develop a roadmap that will more efficiently guide us over the next few years and beyond when funding is less certain. |
Overlap with Other Working Groups | |
Links | http://symbiota.org/docs/ Google Event/Meeting Calendar - Caution - in Pacific Time
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User Engagement for Public Participation in Digitization (CitSciEngage)
Data Field | Details |
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Status | Active |
Members |
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Mission & Scope | Develop successful strategies for engagement of the public in digitization online and onsite. |
Overlap with Other Working Groups | The group's goals most closely complement those of the Interoperability for Public Participation in Digitization Working Group. |
Links |
Website Content Providers Editorial Board and Interest Group
Data Field | Details |
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Status | Active when a need arises |
Members |
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Mission & Scope | We meet to determine content formulation processes, write documents to support access to information for content providers, create and deliver in-house content training, we also constitute an editorial board for the iDigBio.org website content and overall look & feel. We believe in constant improvement, and we aim to keep the level of service to our biodiversity community via the website at a high level of satisfaction. |
Overlap with Other Working Groups | |
Links |
Inactive Working Groups
Authority Files
Data Field | Details |
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Status | Merged: The Authority Files Working Group has merged with the MISC Working Group, with Katja Seltmann and Gil Nelson as Co-Leads. See below: Minimum Information Standards, Authority Files, & Semantics. |
Original Members (Now Included Below) |
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Past Members |
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Mission & Scope | |
Overlap with other Working Groups | |
Links | Authority File Working Group Resources |
Cyberinfrastructure (CYWG)
Data Field | Details |
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Status | Active |
Members |
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Past Members |
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Mission & Scope | Define, document and test iDigBio service Application Programming Interfaces (APIs) and appliances. The first phase will focus on data ingestion APIs and appliances considering TCN use cases.
Definition and documentation of potential services and appliances for OCR and georeferencing are left to the respective working groups. Definition of data structure for ingestion is left to MISC working group. |
Overlap with Other Working Groups | None |
Links |
Intellectual Property Policy
Data Field | Details |
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Status | Inactive |
Members |
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Mission & Scope | Produce a clear Intellectual Property Policy to establish data ownership rights and data re-use requirements related to content presented via iDigBio by collections and institutions. |
Overlap with Other Working Groups | None identified |
Links |
Note: This document is open for community comment |
Minimum Information Standards, Authority Files, & Semantics (MISC)
Data Field | Details |
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Status | Done (Inactive), activated when a need arises |
Members |
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Mission & Scope | 1) Establish the working group and its goals, with the guidance of participants from the MISC breakout group from iDigBio's It Standards workshop. 2) Document basic assumptions underpinning a minimal information for scientific collections expectation. 3) Develop a document outlining and providing a rationale for required, minimal, desired, and supplementary data elements to be provided by iDigBio contributors. 4) Develop guidelines for data validation, training and assistance to iDigBio contributors for configuring data for ingestion into the iDigBio portal. |
Overlap with Other Working Groups | The overlap between the Minimum Information for Scientific Collections (MISC) and Authority Files Working groups prompted merging into a single working group. |
Links | MISC Authority File Working Group, Discussion Forum |
Paleontology (Paleo)
Data Field | Details |
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Status | Inactive |
Members |
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Mission & Scope | This group is currently being formed. One of the group's first tasks will be to define a Mission and Scope. Broadly, the group will maintain awareness of digitization activities and needs within the Paleontology community, and promote communication between Neontology/Paleontology/Information Technology partners. |
Overlap with Other Working Groups | |
Links | Listserv, Discussion Forum, Working Group Wiki |
Public Participation in Digitization (CitSci)
Data Field | Details |
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Status | Inactive |
Members |
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Mission & Scope | Identify and improve aspects of biodiversity digitization workflows that can be newly architected or enhanced to take advantage of public participation. This working group completed its initial goals and has been replaced by the Interoperability for Public Participation in Digitization Working Group and the User Engagement for Public Participation in Digitization Working Group. |
Overlap with Other Working Groups | |
Links |
Strategic Communication Interest Group
Data Field | Details |
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Status | Active |
Members |
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Mission & Scope | We will be developing a strategic communications plan and organizing an advisory panel of communications experts, corporate social responsibility and fundraising experts, and key stakeholders from the collections community. Our collective charge is: (1) to develop a unified platform for communicating the importance of digitization efforts; (2) to identify specific needs of the collection community, develop strategies for addressing these needs through communications activities (including education and outreach), and formalize goals and objectives; and (3) to design implementable activities that can meet our goals/objectives and effectively engage iDigBio target audiences. We will provide recommendations to iDigBio that increase the momentum of digitization/outreach activities on a national scale and ensure the long-term sustainability of these efforts. |
Overlap with Other Working Groups | |
Links |